QurvE: user-friendly software for the analysis of biological growth and fluorescence data
- Nicolas T Wirth, Jonathan Funk, Stefano Donati, …, Jonathan Funk, Stefano Donati, Pablo I Nikel
- Nat Protoc, 10.1038/s41596-023-00850-7
Core and auxiliary functions of one-carbon metabolism in Pseudomonas putida exposed by a systems-level analysis of transcriptional and physiological responses
- Justine Turlin, Òscar Puiggené, Stefano Donati, …, Stefano Donati, Nicolas T Wirth, Pablo I Nikel
- mSystems, 10.1128/msystems.00004-23
Protocol for absolute quantification of proteins in Gram-negative bacteria based on QconCAT-based labeled peptides
- Nicolás Gurdo, Shannara Kayleigh Taylor Parkins, Martina Fricano, …, Tune Wulff, Lars Keld Nielsen, Pablo Iván Nikel
- STAR Protoc, 10.1016/j.xpro.2023.102060
Current landscape and future directions of synthetic biology in South America
- E Sebastian Gomez-Hinostroza, Nicolás Gurdo, María Victoria Gracia Alvan Vargas, …, David J Castillo Cornejo, Raúl Platero, Carlos Barba-Ostria
- None, 10.3389/fbioe.2023.1069628
Automating the design-build-test-learn cycle towards next-generation bacterial cell factories
- Nicolás Gurdo, Daniel C Volke, Douglas McCloskey, …, Daniel C Volke, Douglas McCloskey, Pablo Iván Nikel
- N Biotechnol, 10.1016/j.nbt.2023.01.002
Exploiting synergies between microbial electrochemical technologies and synthetic biology
- Bin Lai, Jens Krömer, Federico Aulenta, …, Federico Aulenta, Hui Wu, Pablo Ivan Nikel
- Microb Biotechnol, 10.1111/1751-7915.14208
SEVA 4.0: an update of the Standard European Vector Architecture database for advanced analysis and programming of bacterial phenotypes
- Esteban Martínez-García, Sofía Fraile, Elena Algar, …, Pablo I Nikel, Juan Nogales, Víctor de Lorenzo
- Nucleic Acids Res, 10.1093/nar/gkac1059
Engineering of Pseudomonas putida for accelerated co-utilization of glucose and cellobiose yields aerobic overproduction of pyruvate explained by an upgraded metabolic model
- Dalimil Bujdoš, Barbora Popelářová, Daniel C Volke, …, Pablo I Nikel, Nikolaus Sonnenschein, Pavel Dvořák
- Metab Eng, 10.1016/j.ymben.2022.10.011
Integrated rational and evolutionary engineering of genome-reduced Pseudomonas putida strains promotes synthetic formate assimilation
- Justine Turlin, Beau Dronsella, Alberto De Maria, Steffen N Lindner, Pablo I Nikel
- Metab Eng, 10.1016/j.ymben.2022.10.008
Challenges and opportunities in bringing nonbiological atoms to life with synthetic metabolism
- Robert Haas, Pablo I Nikel, Robert Haas, …, Pablo I Nikel, Robert Haas, Pablo I Nikel
- Trends Biotechnol, 10.1016/j.tibtech.2022.06.004