Academic lineage
- Bernhard Ø Palsson - Postdoctoral Associate
Laboratory evolution reveals general and specific tolerance mechanisms for commodity chemicals
- Rebecca M Lennen, Hyun Gyu Lim, Kristian Jensen, …, Morten O A Sommer, Markus J HerrgÃ¥rd, Adam M Feist
- Metab Eng, 10.1016/j.ymben.2023.01.012
A Genome-Scale Metabolic Model of Methanoperedens nitroreducens : Assessing Bioenergetics and Thermodynamic Feasibility
- Bingqing He, Chen Cai, Tim McCubbin, …, Shihu Hu, Zhiguo Yuan, Esteban Marcellin
- None, 10.3390/metabo12040314
Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies
- Ibrahim E Elsemman, Angelica Rodriguez Prado, Pranas Grigaitis, …, Pascale Daran-Lapujade, Jens Nielsen, Bas Teusink
- Nat Commun, 10.1038/s41467-022-28467-6
Engineering precursor supply for the high-level production of ergothioneine in Saccharomyces cerevisiae
- Steven A van der Hoek, Matej Rusnák, Guokun Wang, …, Behrooz Darbani, Douglas B Kell, Irina Borodina
- Metab Eng, 10.1016/j.ymben.2022.01.012
Genome-scale metabolic modeling of P. thermoglucosidasius NCIMB 11955 reveals metabolic bottlenecks in anaerobic metabolism
- Viviënne Mol, Martyn Bennett, BenjamÃn J Sánchez, …, Alex Toftgaard Nielsen, David J Leak, Nikolaus Sonnenschein
- Metab Eng, 10.1016/j.ymben.2021.03.002
Single-Cell Technologies to Understand the Mechanisms of Cellular Adaptation in Chemostats
- Naia Risager Wright, Nanna Petersen Rønnest, Nikolaus Sonnenschein
- None, 10.3389/fbioe.2020.579841
Fluctuations in glucose availability prevent global proteome changes and physiological transition during prolonged chemostat cultivations of Saccharomyces cerevisiae
- Naia R Wright, Tune Wulff, Eva A Palmqvist, …, Nikolaus Sonnenschein, Nanna P Rønnest, Markus J HerrgÃ¥rd
- Biotechnol Bioeng, 10.1002/bit.27353
MEMOTE for standardized genome-scale metabolic model testing
- Christian Lieven, Moritz E Beber, Brett G Olivier, …, Qianqian Yuan, Maksim Zakhartsev, Cheng Zhang
- Nat Biotechnol, 10.1038/s41587-020-0446-y
OptCouple: Joint simulation of gene knockouts, insertions and medium modifications for prediction of growth-coupled strain designs
- Kristian Jensen, Valentijn Broeken, Anne Sofie Lærke Hansen, Nikolaus Sonnenschein, Markus J Herrgård
- Metab Eng, 10.1016/j.mec.2019.e00087
Combined In-Cell NMR and Simulation Approach to Probe Redox-Dependent Pathway Control
- Pernille R Jensen, Marta R A Matos, Nikolaus Sonnenschein, Sebastian Meier
- Anal Chem, 10.1021/acs.analchem.9b00660
Improving Reproducibility in Synthetic Biology
- Mathew M Jessop-Fabre, Nikolaus Sonnenschein
- None, 10.3389/fbioe.2019.00018