Small-molecule autocatalytic networks are universal metabolic fossils
- Joana C Xavier, Stuart Kauffman
- Philos Trans A Math Phys Eng Sci, 10.1098/rsta.2021.0244
Energy at Origins: Favorable Thermodynamics of Biosynthetic Reactions in the Last Universal Common Ancestor (LUCA)
- Jessica L E Wimmer, Joana C Xavier, Andrey D N Vieira, …, Karl Kleinermanns, Martina Preiner, William F Martin
- None, 10.3389/fmicb.2021.793664
The metabolic network of the last bacterial common ancestor
- Joana C Xavier, Rebecca E Gerhards, Jessica L E Wimmer, Julia Brueckner, Fernando D K Tria, William F Martin
- Commun Biol, 10.1038/s42003-021-01918-4
Gene Duplications Trace Mitochondria to the Onset of Eukaryote Complexity
- Fernando D K Tria, Julia Brueckner, Josip Skejo, …, Sven B Gould, Sriram G Garg, William F Martin
- Genome Biol Evol, 10.1093/gbe/evab055
The Autotrophic Core: An Ancient Network of 404 Reactions Converts H 2 , CO 2 , and NH 3 into Amino Acids, Bases, and Cofactors
- Jessica L E Wimmer, Andrey do Nascimento Vieira, Joana C Xavier, Karl Kleinermanns, William F Martin, Martina Preiner
- None, 10.3390/microorganisms9020458
The structure of autocatalytic networks, with application to early biochemistry
- Mike Steel, Joana C Xavier, Daniel H Huson
- J R Soc Interface, 10.1098/rsif.2020.0488
MEMOTE for standardized genome-scale metabolic model testing
- Christian Lieven, Moritz E Beber, Brett G Olivier, …, Qianqian Yuan, Maksim Zakhartsev, Cheng Zhang
- Nat Biotechnol, 10.1038/s41587-020-0446-y
The Future of Origin of Life Research: Bridging Decades-Old Divisions
- Martina Preiner, Silke Asche, Sidney Becker, …, Fernando D K Tria, Dániel Vörös, Joana C Xavier
- None, 10.3390/life10030020
Catalysts, autocatalysis and the origin of metabolism
- Martina Preiner, Joana C Xavier, Andrey do Nascimento Vieira, Karl Kleinermanns, John F Allen, William F Martin
- None, 10.1098/rsfs.2019.0072
Autocatalytic networks in biology: structural theory and algorithms
- Mike Steel, Wim Hordijk, Joana C Xavier
- J R Soc Interface, 10.1098/rsif.2018.0808
Sediment, methane and energy
- Joana C Xavier, William F Martin
- Nat Microbiol, 10.1038/s41564-019-0417-6