Academic lineage
- Bernhard Ø Palsson - Ph.D. student
Causal mutations from adaptive laboratory evolution are outlined by multiple scales of genome annotations and condition-specificity
- Patrick V Phaneuf, James T Yurkovich, David Heckmann, …, Justin Tan, Bernhard O Palsson, Adam M Feist
- BMC Genomics, 10.1186/s12864-020-06920-4
Independent component analysis of E. coli’s transcriptome reveals the cellular processes that respond to heterologous gene expression
- Justin Tan, Anand V Sastry, Karoline S Fremming, …, Sangwoo Seo, Bjørn G Voldborg, Bernhard O Palsson
- Metab Eng, 10.1016/j.ymben.2020.07.002
The Importance of Protein Phosphorylation for Signaling and Metabolism in Response to Diel Light Cycling and Nutrient Availability in a Marine Diatom
- Maxine H Tan, Sarah R Smith, Kim K Hixson, …, James K McCarthy, Adam B Kustka, Andrew E Allen
- None, 10.3390/biology9070155
Cellular responses to reactive oxygen species are predicted from molecular mechanisms
- Laurence Yang, Nathan Mih, Amitesh Anand, …, Ying Hefner, Adam M Feist, Bernhard O Palsson
- Proc Natl Acad Sci U S A, 10.1073/pnas.1905039116
Multi-omic data integration enables discovery of hidden biological regularities
- Ali Ebrahim, Elizabeth Brunk, Justin Tan, …, Aarash Bordbar, Adam M Feist, Bernhard O Palsson
- Nat Commun, 10.1038/ncomms13091
Evaluation of rate law approximations in bottom-up kinetic models of metabolism
- Bin Du, Daniel C Zielinski, Erol S Kavvas, …, Kayla E Ruggiero, Garri A Arzumanyan, Bernhard O Palsson
- None, 10.1186/s12918-016-0283-2
Systems biology definition of the core proteome of metabolism and expression is consistent with high-throughput data
- Laurence Yang, Justin Tan, Edward J O’Brien, …, Yuekai Sun, Michael A Saunders, Bernhard O Palsson
- Proc Natl Acad Sci U S A, 10.1073/pnas.1501384112
Caveolae in ventricular myocytes are required for stretch-dependent conduction slowing
- E R Pfeiffer, A T Wright, A G Edwards, …, D M Roth, J H Omens, A D McCulloch
- J Mol Cell Cardiol, 10.1016/j.yjmcc.2014.09.014
Supplementation of saturated long-chain fatty acids maintains intestinal eubiosis and reduces ethanol-induced liver injury in mice
- Peng Chen, Manolito Torralba, Justin Tan, …, Karen E Nelson, Derrick E Fouts, Bernd Schnabl
- Gastroenterology, 10.1053/j.gastro.2014.09.014