Academic lineage
- Bernhard Ø Palsson - Ph.D. student
A metabolic CRISPR-Cas9 screen in Chinese hamster ovary cells identifies glutamine-sensitive genes
- Karen Julie la Cour Karottki, Hooman Hefzi, Songyuan Li, …, Gyun Min Lee, Helene Faustrup Kildegaard, Nathan E Lewis
- Metab Eng, 10.1016/j.ymben.2021.03.017
Systems biology analysis of drivers underlying hallmarks of cancer cell metabolism
- Daniel C Zielinski, Neema Jamshidi, Austin J Corbett, Aarash Bordbar, Alex Thomas, Bernhard O Palsson
- Sci Rep, 10.1038/srep41241
A Consensus Genome-scale Reconstruction of Chinese Hamster Ovary Cell Metabolism
- Hooman Hefzi, Kok Siong Ang, Michael Hanscho, …, Nicole Borth, Dong-Yup Lee, Nathan E Lewis
- Cell Syst, 10.1016/j.cels.2016.10.020
Recon 2.2: from reconstruction to model of human metabolism
- Neil Swainston, Kieran Smallbone, Hooman Hefzi, …, Douglas B Kell, Nathan E Lewis, Pedro Mendes
- Metabolomics, 10.1007/s11306-016-1051-4
Systems biology definition of the core proteome of metabolism and expression is consistent with high-throughput data
- Laurence Yang, Justin Tan, Edward J O’Brien, …, Yuekai Sun, Michael A Saunders, Bernhard O Palsson
- Proc Natl Acad Sci U S A, 10.1073/pnas.1501384112
JSBML 1.0: providing a smorgasbord of options to encode systems biology models
- Nicolas Rodriguez, Alex Thomas, Leandro Watanabe, …, Bernhard Ø Palsson, Michael Hucka, Andreas Dräger
- Bioinformatics, 10.1093/bioinformatics/btv341
Network reconstruction of platelet metabolism identifies metabolic signature for aspirin resistance
- Alex Thomas, Sorena Rahmanian, Aarash Bordbar, Bernhard Ø Palsson, Neema Jamshidi
- Sci Rep, 10.1038/srep03925