The Salivary Microbiome and Predicted Metabolite Production are Associated with Progression from Barrett’s Esophagus to Esophageal Adenocarcinoma
- Quinn S Solfisburg, Federico Baldini, Brittany L Baldwin-Hunter, …, Charles J Lightdale, Tal Korem, Julian A Abrams
- None, 10.1101/2023.06.27.546733
Contamination source modeling with SCRuB improves cancer phenotype prediction from microbiome data
- George I Austin, Heekuk Park, Yoli Meydan, …, Anne-Catrin Uhlemann, Liat Shenhav, Tal Korem
- Nat Biotechnol, 10.1038/s41587-023-01696-w
Microdiversity of the Vaginal Microbiome is Associated with Preterm Birth
- Jingqiu Liao, Liat Shenhav, Myrna Serrano, …, Bin Zhu, Gregory A Buck, Tal Korem
- None, 10.1101/2023.01.13.523991
Preterm birth is associated with xenobiotics and predicted by the vaginal metabolome
- William F Kindschuh, Federico Baldini, Martin C Liu, …, Christoph A Thaiss, Maayan Levy, Tal Korem
- Nat Microbiol, 10.1038/s41564-022-01293-8
The Gut Microbiome of Adults With Type 1 Diabetes and Its Association With the Host Glycemic Control
- Smadar Shilo, Anastasia Godneva, Marianna Rachmiel, …, Adina Weinberger, Orit Pinhas-Hamiel, Eran Segal
- Diabetes Care, 10.2337/dc21-1656
Accurate and robust inference of microbial growth dynamics from metagenomic sequencing reveals personalized growth rates
- Tyler A Joseph, Philippe Chlenski, Aviya Litman, Tal Korem, Itsik Pe’er
- Genome Res, 10.1101/gr.275533.121
A non-optimal cervicovaginal microbiota in pregnancy is associated with a distinct metabolomic signature among non-Hispanic Black individuals
- Kristin D Gerson, Jingqiu Liao, Clare McCarthy, …, Maayan Levy, Jacques Ravel, Michal A Elovitz
- Sci Rep, 10.1038/s41598-021-02304-0
Prediction of Personal Glycemic Responses to Food for Individuals With Type 1 Diabetes Through Integration of Clinical and Microbial Data
- Smadar Shilo, Anastasia Godneva, Marianna Rachmiel, …, Adina Weinberger, Orit Pinhas-Hamiel, Eran Segal
- Diabetes Care, 10.2337/dc21-1048
Minimal Associations between Short-Term Dietary Intake and Salivary Microbiome Composition
- Judith Kim, Minyi Lee, Brittany Baldwin-Hunter, …, Tal Korem, Chin Hur, Julian A Abrams
- None, 10.3390/microorganisms9081739
Embracing Metagenomic Complexity with a Genome-Free Approach
- Izaak Coleman, Tal Korem
- mSystems, 10.1128/msystems.00816-21
Deciphering metabolism, one microbe at a time
- William F Kindschuh, Tal Korem
- Nature, 10.1038/d41586-021-01774-6
Relationship of the Esophageal Microbiome and Tissue Gene Expression and Links to the Oral Microbiome: A Randomized Clinical Trial
- Medini K Annavajhala, Michael May, Griselda Compres, …, Tal Korem, Anne-Catrin Uhlemann, Julian A Abrams
- Clin Transl Gastroenterol, 10.14309/ctg.0000000000000235
Longitudinal Multi-omics Reveals Subset-Specific Mechanisms Underlying Irritable Bowel Syndrome
- Ruben A T Mars, Yi Yang, Tonya Ward, …, Jonathan R Swann, Dan Knights, Purna C Kashyap
- Cell, 10.1016/j.cell.2020.10.040
The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View
- Joao B Xavier, Vincent B Young, Joseph Skufca, …, Michael Yu, Libusha Kelly, Jennifer A Wargo
- Trends Cancer, 10.1016/j.trecan.2020.01.004
Structural variation in the gut microbiome associates with host health
- David Zeevi, Tal Korem, Anastasia Godneva, …, Cisca Wijmenga, Alexandra Zhernakova, Eran Segal
- Nature, 10.1038/s41586-019-1065-y
Post-Antibiotic Gut Mucosal Microbiome Reconstitution Is Impaired by Probiotics and Improved by Autologous FMT
- Jotham Suez, Niv Zmora, Gili Zilberman-Schapira, …, Zamir Halpern, Eran Segal, Eran Elinav
- Cell, 10.1016/j.cell.2018.08.047