A multi-scale map of protein assemblies in the DNA damage response
- Anton Kratz, Minkyu Kim, Marcus R Kelly, …, Robert W Sobol, Nevan J Krogan, Trey Ideker
- Cell Syst, 10.1016/j.cels.2023.04.007
Current proteomics methods applicable to dissecting the DNA damage response
- Monita Muralidharan, Nevan J Krogan, Mehdi Bouhaddou, …, Nevan J Krogan, Mehdi Bouhaddou, Minkyu Kim
- Nucleic Acids Res, 10.1093/narcan/zcad020
Network modeling suggests HIV infection phenocopies PI3K-AKT pathway mutations to enhance HPV-associated cervical cancer
- Jacqueline M Fabius, Lorena Zuliani-Alvarez, Manon Eckhardt, …, Nevan J Krogan, Mehdi Bouhaddou, Yaw Bediako
- Mol Omics, 10.1039/d3mo00025g
An automated proximity proteomics pipeline for subcellular proteome and protein interaction mapping
- Xiaofang Zhong, Qiongyu Li, Benjamin J Polacco, …, Mark Von Zastrow, Nevan J Krogan, Ruth Hüttenhain
- None, 10.1101/2023.04.11.536358
Quantitative Proteomic Analysis Reveals apoE4-Dependent Phosphorylation of the Actin-Regulating Protein VASP
- Zeynep Cakir, Samuel J Lord, Yuan Zhou, …, Nevan J Krogan, Robert W Mahley, Danielle L Swaney
- Mol Cell Proteomics, 10.1016/j.mcpro.2023.100541
Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13
- Sun Kyung Kim, Miles Sasha Dickinson, Janet Finer-Moore, …, Nevan J Krogan, Oren S Rosenberg, Robert M Stroud
- Nat Struct Mol Biol, 10.1038/s41594-022-00918-0
Next-generation interaction proteomics for quantitative Jumbophage-bacteria interaction mapping
- Andrea Fossati, Deepto Mozumdar, Claire Kokontis, …, David A Agard, Joseph Bondy-Denomy, Danielle L Swaney
- None, 10.1101/2023.01.13.523954
Oncogenic PKA signaling increases c-MYC protein expression through multiple targetable mechanisms
- Gary K L Chan, Samantha Maisel, Yeonjoo C Hwang, …, John D Scott, Nabeel Bardeesy, John D Gordan
- Elife, 10.7554/elife.69521
How can systems approaches help us understand and treat infectious disease?
- Anna Kuchina, Jason Yang, Bree Aldridge, …, Shirit Einav, Jason Papin, Ronald N Germain
- Cell Syst, 10.1016/j.cels.2022.11.009
Low expression of EXOSC2 protects against clinical COVID-19 and impedes SARS-CoV-2 replication
- Tobias Moll, Valerie Odon, Calum Harvey, …, Pamela J Shaw, Jan Rehwinkel, Johnathan Cooper-Knock
- Life Sci Alliance, 10.26508/lsa.202201449
Workshop-based learning and networking: a scalable model for research capacity strengthening in low- and middle-income countries
- Celine Perier, Emmanuel Nasinghe, Isabelle Charles, …, Jeffery S Cox, Moses L Joloba, Julia Schaletzky
- Glob Health Action, 10.1080/16549716.2022.2062175
