CRISPR-Associated Transposase for Targeted Mutagenesis in Diverse Proteobacteria
- Lidimarie Trujillo RodrÃguez, Adam J Ellington, Christopher R Reisch, …, Adam J Ellington, Christopher R Reisch, Marc G Chevrette
- ACS Synth Biol, 10.1021/acssynbio.3c00065
Genomic diversification of the specialized parasite of the fungus-growing ant symbiosis
- Kirsten Gotting, Daniel S May, Jeffrey Sosa-Calvo, …, J Spencer Johnston, Nicole M Gerardo, Cameron R Currie
- Proc Natl Acad Sci U S A, 10.1073/pnas.2213096119
MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters
- Barbara R Terlouw, Kai Blin, Jorge C Navarro-Muñoz, …, Roger G Linington, Tilmann Weber, Marnix H Medema
- Nucleic Acids Res, 10.1093/nar/gkac1049
Microbiome composition modulates secondary metabolism in a multispecies bacterial community
- Marc G Chevrette, Chris S Thomas, Amanda Hurley, …, Austin Hall, Shruthi Magesh, Jo Handelsman
- Proc Natl Acad Sci U S A, 10.1073/pnas.2212930119
Evolutionary Genome Mining for the Discovery and Engineering of Natural Product Biosynthesis
- Marc G Chevrette, Nelly Selem-Mojica, César Aguilar, …, Edder D Bustos-Diaz, Jo Handelsman, Francisco Barona-Gómez
- Methods Mol Biol, 10.1007/978-1-0716-2273-5_8
Ten quick tips for deep learning in biology
- Benjamin D Lee, Anthony Gitter, Casey S Greene, …, Benjamin J Lengerich, Timothy J Triche, Simina M Boca
- PLoS Comput Biol, 10.1371/journal.pcbi.1009803
Long-Term Cellulose Enrichment Selects for Highly Cellulolytic Consortia and Competition for Public Goods
- Gina R Lewin, Nicole M Davis, Bradon R McDonald, …, Steven Suh, Ardina Boll, Cameron R Currie
- mSystems, 10.1128/msystems.01519-21
Nutrient Availability Shifts the Biosynthetic Potential of Soil-Derived Microbial Communities
- Marc G Chevrette, Bradley W Himes, Camila Carlos-Shanley
- Curr Microbiol, 10.1007/s00284-021-02746-9
Coordination of fungal biofilm development by extracellular vesicle cargo
- Robert Zarnowski, Andrea Noll, Marc G Chevrette, …, Jeniel E Nett, Aaron Mitchell, David R Andes
- Nat Commun, 10.1038/s41467-021-26525-z
Needles in haystacks: reevaluating old paradigms for the discovery of bacterial secondary metabolites
- Marc G Chevrette, Jo Handelsman
- Nat Prod Rep, 10.1039/d1np00044f
Evolution of combinatorial diversity in trans-acyltransferase polyketide synthase assembly lines across bacteria
- Eric J N Helfrich, Reiko Ueoka, Marc G Chevrette, …, Steven E Lindow, Jörn Piel, Marnix H Medema
- Nat Commun, 10.1038/s41467-021-21163-x
Tiny Earth: A Big Idea for STEM Education and Antibiotic Discovery
- Amanda Hurley, Marc G Chevrette, Deepa D Acharya, …, Sarah Miller, Nichole A Broderick, Jo Handelsman
- mBio, 10.1128/mbio.03432-20
A community resource for paired genomic and metabolomic data mining
- Michelle A Schorn, Stefan Verhoeven, Lars Ridder, …, Pieter C Dorrestein, Marnix H Medema, Justin J J van der Hooft
- Nat Chem Biol, 10.1038/s41589-020-00724-z