Academic lineage
S1000: a better taxonomic name corpus for biomedical information extraction
- Jouni Luoma, Katerina Nastou, Tomoko Ohta, …, Evangelos Pafilis, Lars Juhl Jensen, Sampo Pyysalo
- Bioinformatics, 10.1093/bioinformatics/btad369
Metastatic Infiltration of Nervous Tissue and Periosteal Nerve Sprouting in Multiple Myeloma-Induced Bone Pain in Mice and Human
- Marta Diaz-delCastillo, Oana Palasca, Tim T Nemler, …, Thomas L Andersen, Juan M Jimenez-Andrade, Anne-Marie Heegaard
- J Neurosci, 10.1523/jneurosci.0404-23.2023
About the dark corners in the gene function space of Escherichia coli remaining without illumination by scientific literature
- Erwin Tantoso, Birgit Eisenhaber, Swati Sinha, …, Swati Sinha, Lars Juhl Jensen, Frank Eisenhaber
- Biol Direct, 10.1186/s13062-023-00362-0
Cross-species high-resolution transcriptome profiling suggests biomarkers and therapeutic targets for ulcerative colitis
- Reza Yarani, Oana Palasca, Nadezhda T Doncheva, …, Lars J Jensen, Jan Gorodkin, Flemming Pociot
- None, 10.3389/fmolb.2022.1081176
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks
- Nadezhda T Doncheva, John H Morris, Henrietta Holze, …, Damian Szklarczyk, Christian von Mering, Lars J Jensen
- J Proteome Res, 10.1021/acs.jproteome.2c00651
eggNOG 6.0: enabling comparative genomics across 12Â 535 organisms
- Ana Hernández-Plaza, Damian Szklarczyk, Jorge Botas, …, Peer Bork, Christian von Mering, Jaime Huerta-Cepas
- Nucleic Acids Res, 10.1093/nar/gkac1022
Identifying the genes impacted by cell proliferation in proteomics and transcriptomics studies
- Marie Locard-Paulet, Oana Palasca, Lars Juhl Jensen
- PLoS Comput Biol, 10.1371/journal.pcbi.1010604
The impact of PrsA over-expression on the Bacillus subtilis transcriptome during fed-batch fermentation of alpha-amylase production
- Adrian S Geissler, Line D Poulsen, Nadezhda T Doncheva, …, Carsten Hjort, Jeppe Vinther, Jan Gorodkin
- None, 10.3389/fmicb.2022.909493
Light-induced asymmetries in embryonic retinal gene expression are mediated by the vascular system and extracellular matrix
- Elisabetta Versace, Paola Sgadò, Julia George, …, Karen A Spencer, Silvia Paracchini, Giorgio Vallortigara
- Sci Rep, 10.1038/s41598-022-14963-8
A time-resolved multi-omics atlas of Acanthamoeba castellanii encystment
- Clément Bernard, Marie Locard-Paulet, Cyril Noël, …, Lars Juhl Jensen, Mariette Matondo, Ascel Samba-Louaka
- Nat Commun, 10.1038/s41467-022-31832-0