Chemotaxis and autoinducer-2 signalling mediate colonization and contribute to co-existence of Escherichia coli strains in the murine gut
- Leanid Laganenka, Jae-Woo Lee, Lukas Malfertheiner, …, Christian von Mering, Victor Sourjik, Wolf-Dietrich Hardt
- Nat Microbiol, 10.1038/s41564-022-01286-7
Cytoscape stringApp 2.0: Analysis and Visualization of Heterogeneous Biological Networks
- Nadezhda T Doncheva, John H Morris, Henrietta Holze, …, Damian Szklarczyk, Christian von Mering, Lars J Jensen
- J Proteome Res, 10.1021/acs.jproteome.2c00651
Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes
- Matthew A Reyna, David Haan, Marta Paczkowska, …, Jüri Reimand, Joshua M Stuart, Benjamin J Raphael
- Nat Commun, 10.1038/s41467-022-32334-9
proGenomes3: approaching one million accurately and consistently annotated high-quality prokaryotic genomes
- Anthony Fullam, Ivica Letunic, Thomas S B Schmidt, …, Christian von Mering, Peer Bork, Daniel R Mende
- Nucleic Acids Res, 10.1093/nar/gkac1078
eggNOG 6.0: enabling comparative genomics across 12Â 535 organisms
- Ana Hernández-Plaza, Damian Szklarczyk, Jorge Botas, …, Peer Bork, Christian von Mering, Jaime Huerta-Cepas
- Nucleic Acids Res, 10.1093/nar/gkac1022
Systematic assessment of pathway databases, based on a diverse collection of user-submitted experiments
- Annika L Gable, Damian Szklarczyk, David Lyon, João F Matias Rodrigues, Christian von Mering
- Brief Bioinform, 10.1093/bib/bbac355
Reproducible Propagation of Species-Rich Soil Bacterial Communities Suggests Robust Underlying Deterministic Principles of Community Formation
- Senka ÄŒauÅ¡ević, Janko Tackmann, Vladimir Sentchilo, …, Vladimir Sentchilo, Christian von Mering, Jan Roelof van der Meer
- mSystems, 10.1128/msystems.00160-22
The Evolution of Ecological Diversity in Acidobacteria
- Johannes Sikorski, Vanessa Baumgartner, Klaus Birkhofer, …, Emily F Solly, Volkmar Wolters, Jörg Overmann
- None, 10.3389/fmicb.2022.715637
Probing Isoform Switching Events in Various Cancer Types: Lessons From Pan-Cancer Studies
- Tülay Karakulak, Holger Moch, Christian von Mering, Abdullah Kahraman
- None, 10.3389/fmolb.2021.726902
treeclimbR pinpoints the data-dependent resolution of hierarchical hypotheses
- Ruizhu Huang, Charlotte Soneson, Pierre-Luc Germain, Thomas S B Schmidt, Christian Von Mering, Mark D Robinson
- Genome Biol, 10.1186/s13059-021-02368-1
Strain-Resolved Dynamics of the Lung Microbiome in Patients with Cystic Fibrosis
- Marija Dmitrijeva, Christian R Kahlert, Rounak Feigelman, …, Werner C Albrich, Florent Baty, Christian von Mering
- mBio, 10.1128/mbio.02863-20