Adaptive and maladaptive introgression in grapevine domestication
- Hua Xiao, Zhongjie Liu, Nan Wang, …, Andrew M Walker, Brandon S Gaut, Yongfeng Zhou
- Proc Natl Acad Sci U S A, 10.1073/pnas.2222041120
Multigenic resistance to Xylella fastidiosa in wild grapes (Vitis sps.) and its implications within a changing climate
- Abraham Morales-Cruz, Jonas Aguirre-Liguori, Mélanie Massonnet, …, Yongfeng Zhou, Dario Cantu, Brandon S Gaut
- Commun Biol, 10.1038/s42003-023-04938-4
Phenotypic and Genotypic Adaptation of Escherichia coli to Thermal Stress is Contingent on Genetic Background
- Tiffany N Batarseh, Sarah N Batarseh, Alejandra RodrÃguez-Verdugo, …, Sarah N Batarseh, Alejandra RodrÃguez-Verdugo, Brandon S Gaut
- Mol Biol Evol, 10.1093/molbev/msad108
Variation in Sphingomonas traits across habitats and phylogenetic clades
- Bahareh Sorouri, Cynthia I Rodriguez, Brandon S Gaut, …, Cynthia I Rodriguez, Brandon S Gaut, Steven D Allison
- None, 10.3389/fmicb.2023.1146165
Inaugural Editorial, January 2023
- Brandon S Gaut, Claudia A M Russo, Brandon S Gaut, …, Claudia A M Russo, Brandon S Gaut, Claudia A M Russo
- Mol Biol Evol, 10.1093/molbev/msac265
Insights into the domestication of avocado and potential genetic contributors to heterodichogamy
- Edwin Solares, Abraham Morales-Cruz, Rosa Figueroa Balderas, …, Dario Cantu, Mary Lu Arpaia, Brandon S Gaut
- G3 (Bethesda), 10.1093/g3journal/jkac323
Structural variation and parallel evolution of apomixis in citrus during domestication and diversification
- Nan Wang, Xietian Song, Junli Ye, …, Anna M G Koltunow, Yongfeng Zhou, Xiuxin Deng
- None, 10.1093/nsr/nwac114
Evaluating the persistence and utility of five wild Vitis species in the context of climate change
- Jonas A Aguirre-Liguori, Abraham Morales-Cruz, Brandon S Gaut, …, Jonas A Aguirre-Liguori, Abraham Morales-Cruz, Brandon S Gaut
- Mol Ecol, 10.1111/mec.16715
Using Genomes and Evolutionary Analyses to Screen for Host-Specificity and Positive Selection in the Plant Pathogen Xylella fastidiosa
- Tiffany N Batarseh, Abraham Morales-Cruz, Brian Ingel, M Caroline Roper, Brandon S Gaut
- Appl Environ Microbiol, 10.1128/aem.01220-22
The 3D architecture of the pepper genome and its relationship to function and evolution
- Yi Liao, Juntao Wang, Zhangsheng Zhu, …, Bihao Cao, J J Emerson, Changming Chen
- Nat Commun, 10.1038/s41467-022-31112-x
Gene Body Methylation in Plants: Mechanisms, Functions, and Important Implications for Understanding Evolutionary Processes
- Aline M Muyle, Danelle K Seymour, Yuanda Lv, Bruno Huettel, Brandon S Gaut
- Genome Biol Evol, 10.1093/gbe/evac038
Introgression among North American wild grapes (Vitis) fuels biotic and abiotic adaptation
- Abraham Morales-Cruz, Jonas A Aguirre-Liguori, Yongfeng Zhou, …, Andrew M Walker, Dario Cantu, Brandon S Gaut
- Genome Biol, 10.1186/s13059-021-02467-z
CHH Methylation Islands: A Nonconserved Feature of Grass Genomes That Is Positively Associated with Transposable Elements but Negatively Associated with Gene-Body Methylation
- Galen T Martin, Danelle K Seymour, Brandon S Gaut
- Genome Biol Evol, 10.1093/gbe/evab144
HapSolo: an optimization approach for removing secondary haplotigs during diploid genome assembly and scaffolding
- Edwin A Solares, Yuan Tao, Anthony D Long, Brandon S Gaut
- BMC Bioinformatics, 10.1186/s12859-020-03939-y