Academic lineage
- Bernhard Ø Palsson - Postdoctoral Associate
Laboratory evolution of synthetic electron transport system variants reveals a larger metabolic respiratory system and its plasticity
- Amitesh Anand, Arjun Patel, Ke Chen, …, Richard Szubin, Adam M Feist, Bernhard O Palsson
- Nat Commun, 10.1038/s41467-022-30877-5
Machine Learning of Bacterial Transcriptomes Reveals Responses Underlying Differential Antibiotic Susceptibility
- Anand V Sastry, Nicholas Dillon, Amitesh Anand, …, Adam M Feist, Victor Nizet, Bernhard Palsson
- mSphere, 10.1128/msphere.00443-21
Environmental conditions dictate differential evolution of vancomycin resistance in Staphylococcus aureus
- Henrique Machado, Yara Seif, George Sakoulas, …, Bernhard O Palsson, Victor Nizet, Adam M Feist
- Commun Biol, 10.1038/s42003-021-02339-z
Restoration of fitness lost due to dysregulation of the pyruvate dehydrogenase complex is triggered by ribosomal binding site modifications
- Amitesh Anand, Connor A Olson, Anand V Sastry, …, Laurence Yang, Adam M Feist, Bernhard O Palsson
- Cell Rep, 10.1016/j.celrep.2021.108961
Metabolic and genetic basis for auxotrophies in Gram-negative species
- Yara Seif, Kumari Sonal Choudhary, Ying Hefner, Amitesh Anand, Laurence Yang, Bernhard O Palsson
- Proc Natl Acad Sci U S A, 10.1073/pnas.1910499117
Adaptive evolution reveals a tradeoff between growth rate and oxidative stress during naphthoquinone-based aerobic respiration
- Amitesh Anand, Ke Chen, Laurence Yang, …, Richard Szubin, Adam M Feist, Bernhard O Palsson
- Proc Natl Acad Sci U S A, 10.1073/pnas.1909987116
OxyR Is a Convergent Target for Mutations Acquired during Adaptation to Oxidative Stress-Prone Metabolic States
- Amitesh Anand, Ke Chen, Edward Catoiu, …, Laurence Yang, Adam M Feist, Bernhard O Palsson
- Mol Biol Evol, 10.1093/molbev/msz251
Cellular responses to reactive oxygen species are predicted from molecular mechanisms
- Laurence Yang, Nathan Mih, Amitesh Anand, …, Ying Hefner, Adam M Feist, Bernhard O Palsson
- Proc Natl Acad Sci U S A, 10.1073/pnas.1905039116
Pseudogene repair driven by selection pressure applied in experimental evolution
- Amitesh Anand, Connor A Olson, Laurence Yang, …, Richard Szubin, Adam M Feist, Bernhard O Palsson
- Nat Microbiol, 10.1038/s41564-018-0340-2
Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance
- Erol S Kavvas, Edward Catoiu, Nathan Mih, …, Victor Nizet, Jonathan M Monk, Bernhard O Palsson
- Nat Commun, 10.1038/s41467-018-06634-y