Integration of multiple lineage measurements from the same cell reconstructs parallel tumor evolution
- Lennart Kester, Buys de Barbanson, Anna Lyubimova, …, Jarno Drost, Jeroen de Ridder, Alexander van Oudenaarden
- None, 10.1016/j.xgen.2022.100096
scChIX-seq infers dynamic relationships between histone modifications in single cells
- Maria Florescu, Peter Zeller, Buys Anton de Barbanson, …, Buys Anton de Barbanson, Max D Wellenstein, Alexander van Oudenaarden
- Nat Biotechnol, 10.1038/s41587-022-01560-3
Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis
- Peter Zeller, Jake Yeung, Helena Viñas Gaza, …, Maria Florescu, Reinier van der Linden, Alexander van Oudenaarden
- Nat Genet, 10.1038/s41588-022-01260-3
Epiblast inducers capture mouse trophectoderm stem cells in vitro and pattern blastoids for implantation in utero
- Jinwoo Seong, Javier Frias-Aldeguer, Viktoria Holzmann, …, Derk Ten Berge, Niels Geijsen, Nicolas C Rivron
- Cell Stem Cell, 10.1016/j.stem.2022.06.002
Identification of the stress granule transcriptome via RNA-editing in single cells and in vivo
- Wessel van Leeuwen, Michael VanInsberghe, Nico Battich, Fredrik Salmén, Alexander van Oudenaarden, Catherine Rabouille
- Cell Rep Methods, 10.1016/j.crmeth.2022.100235
High-throughput total RNA sequencing in single cells using VASA-seq
- Fredrik Salmen, Joachim De Jonghe, Tomasz S Kaminski, …, Martin Hemberg, Florian Hollfelder, Alexander van Oudenaarden
- Nat Biotechnol, 10.1038/s41587-022-01361-8
Spatial transcriptomics unveils ZBTB11 as a regulator of cardiomyocyte degeneration in arrhythmogenic cardiomyopathy
- Cornelis J Boogerd, GrĂ©gory P A Lacraz, Ăbel VĂ©rtesy, …, Alexander van Oudenaarden, Aryan Vink, Eva van Rooij
- Cardiovasc Res, 10.1093/cvr/cvac072
BMP gradient along the intestinal villus axis controls zonated enterocyte and goblet cell states
- Joep Beumer, Jens Puschhof, Fjodor Yousef Yengej, …, Alexander van Oudenaarden, Ye-Guang Chen, Hans Clevers
- Cell Rep, 10.1016/j.celrep.2022.110438
