Channel: Cell type

2023 Articles

10 207 articles

Spatial multi-omics co-sequencing provides new opportunity for in situ transcriptional regulation study

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Decoding foreign antigen tolerance

  • Roser Vento-Tormo, Roser Vento-Tormo, Roser Vento-Tormo, Roser Vento-Tormo, Roser Vento-Tormo
  • Science, 10.1126/science.adg6260
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AtlasXplore: a web platform for visualizing and sharing spatial epigenome data

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Resident memory T cells develop regional dialects

  • Nicholas J Maurice, Nicholas J Maurice, Nicholas J Maurice, …, Stephen C Jameson, Nicholas J Maurice, Stephen C Jameson
  • Nat Immunol, 10.1038/s41590-022-01416-7
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De Novo Generation of Pulmonary Ionocytes from Normal and Cystic Fibrosis Human Induced Pluripotent Stem Cells

  • Ruobing Wang, Chantelle Simone-Roach, Jonathan Lindstrom-Vautrin, …, Steven M Rowe, Finn J Hawkins, Darrell N Kotton
  • Am J Respir Crit Care Med, 10.1164/rccm.202205-1010le
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LiveSeq: A New Technique to Sample RNA From Cells Without Killing Them

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An oracle predicts regulators of cell identity

  • Jeffrey A Farrell, Jeffrey A Farrell, Jeffrey A Farrell, Jeffrey A Farrell, Jeffrey A Farrell
  • Nature, 10.1038/d41586-023-00251-6
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Massively Parallel Profiling of Accessible Chromatin and Proteins with ASAP-Seq

  • Eleni P Mimitou, Peter Smibert, Caleb A Lareau, …, Eleni P Mimitou, Peter Smibert, Caleb A Lareau
  • Methods Mol Biol, 10.1007/978-1-0716-2899-7_13
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2022 Articles

957 articles

DNA methyltransferases 3A and 3B target specific sequences during mouse gastrulation

  • Aviezer Lifshitz, Markus Mittnenzweig, Elad Chomsky, …, Oren Ben-Kiki, Mirie Zerbib, Amos Tanay
  • Nat Struct Mol Biol, 10.1038/s41594-022-00885-6
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Multimodal chromatin profiling using nanobody-based single-cell CUT&Tag

  • Marek Bartosovic, Gonçalo Castelo-Branco, Marek Bartosovic, Gonçalo Castelo-Branco
  • Nat Biotechnol, 10.1038/s41587-022-01535-4
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Gene regulatory network reconfiguration in direct lineage reprogramming

  • Kenji Kamimoto, Mohd Tayyab Adil, Kunal Jindal, …, Wenjun Kong, Xue Yang, Samantha A Morris
  • Stem Cell Reports, 10.1016/j.stemcr.2022.11.010
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Human gonadal development, cell by cell

  • Valentina Lorenzi, Roser Vento-Tormo, Luz Garcia-Alonso, …, Valentina Lorenzi, Roser Vento-Tormo, Luz Garcia-Alonso
  • Clin Transl Med, 10.1002/ctm2.1123
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Primate gastrulation and early organogenesis at single-cell resolution

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Regionally specific levels and patterns of keratin 8 expression in the mouse embryo visceral endoderm emerge upon anterior-posterior axis determination

  • Evangéline Despin-Guitard, Ronan Quenec’Hdu, Wallis Nahaboo, …, Rudolf E Leube, Claire Chazaud, Isabelle Migeotte
  • None, 10.3389/fcell.2022.1037041
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Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis

  • Peter Zeller, Jake Yeung, Helena Viñas Gaza, …, Maria Florescu, Reinier van der Linden, Alexander van Oudenaarden
  • Nat Genet, 10.1038/s41588-022-01260-3
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Embryogenic stem cell-derived intestinal crypt fission directs de novo crypt genesis

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Benchmarking automated cell type annotation tools for single-cell ATAC-seq data

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Distance covariance entropy reveals primed states and bifurcation dynamics in single-cell RNA-Seq data

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