Academic lineage
Toward Identification of Functional Sequences and Variants in Noncoding DNA
- Remo Monti, Uwe Ohler, Remo Monti, Uwe Ohler, Remo Monti, Uwe Ohler
- Annu Rev Biomed Data Sci, 10.1146/annurev-biodatasci-122120-110102
Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root
- Trevor M Nolan, Nemanja VukaÅ¡inović, Che-Wei Hsu, …, Uwe Ohler, Eugenia Russinova, Philip N Benfey
- Science, 10.1126/science.adf4721
A critical period of translational control during brain development at codon resolution
- Ulrike Zinnall, Alexandra Rusanova, Ekaterina Borisova, …, Victor Tarabykin, Uwe Ohler, Matthew L Kraushar
- Nat Struct Mol Biol, 10.1038/s41594-022-00882-9
Altered and allele-specific open chromatin landscape reveals epigenetic and genetic regulators of innate immunity in COVID-19
- Bowen Zhang, Zhenhua Zhang, Valerie A C M Koeken, …, Markus Cornberg, Leon N Schulte, Yang Li
- None, 10.1016/j.xgen.2022.100232
Protocol for fast scRNA-seq raw data processing using scKB and non-arbitrary quality control with COPILOT
- Che-Wei Hsu, Rachel Shahan, Trevor M Nolan, …, Trevor M Nolan, Philip N Benfey, Uwe Ohler
- STAR Protoc, 10.1016/j.xpro.2022.101729
Control of immediate early gene expression by CPEB4-repressor complex-mediated mRNA degradation
- Fabian Poetz, Svetlana Lebedeva, Johanna Schott, Doris Lindner, Uwe Ohler, Georg Stoecklin
- Genome Biol, 10.1186/s13059-022-02760-5
Identifying interpretable gene-biomarker associations with functionally informed kernel-based tests in 190,000 exomes
- Remo Monti, Pia Rautenstrauch, Mahsa Ghanbari, …, Uwe Ohler, Stefan Konigorski, Christoph Lippert
- Nat Commun, 10.1038/s41467-022-32864-2
Cluster-independent marker feature identification from single-cell omics data using SEMITONES
- Anna Hendrika Cornelia Vlot, Setareh Maghsudi, Uwe Ohler
- Nucleic Acids Res, 10.1093/nar/gkac639
Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements
- Damir Baranasic, Matthias Hörtenhuber, Piotr J Balwierz, …, Carsten O Daub, Boris Lenhard, Ferenc Müller
- Nat Genet, 10.1038/s41588-022-01089-w
The BTB transcription factors ZBTB11 and ZFP131 maintain pluripotency by repressing pro-differentiation genes
- Görkem Garipler, Congyi Lu, Alexis Morrissey, …, Shaun Mahony, Neville E Sanjana, Esteban O Mazzoni
- Cell Rep, 10.1016/j.celrep.2022.110524
A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants
- Rachel Shahan, Che-Wei Hsu, Trevor M Nolan, …, Geoffrey Schiebinger, Philip N Benfey, Uwe Ohler
- Dev Cell, 10.1016/j.devcel.2022.01.008
Deep learning for prediction of population health costs
- Philipp Drewe-Boss, Dirk Enders, Jochen Walker, Uwe Ohler
- BMC Med Inform Decis Mak, 10.1186/s12911-021-01743-z
Intricacies of single-cell multi-omics data integration
- Pia Rautenstrauch, Anna Hendrika Cornelia Vlot, Sepideh Saran, Uwe Ohler
- Trends Genet, 10.1016/j.tig.2021.08.012
SLM2 Is A Novel Cardiac Splicing Factor Involved in Heart Failure due to Dilated Cardiomyopathy
- Jes-Niels Boeckel, Maximilian Möbius-Winkler, Marion Müller, …, Ulrich Laufs, Katrin Streckfuss-Bömeke, Benjamin Meder
- Genomics Proteomics Bioinformatics, 10.1016/j.gpb.2021.01.006