K-FIT: An accelerated kinetic parameterization algorithm using steady-state fluxomic data
- Saratram Gopalakrishnan, Satyakam Dash, Costas Maranas
- Metab Eng, 10.1016/j.ymben.2020.03.001
Thermodynamic analysis of the pathway for ethanol production from cellobiose in Clostridium thermocellum
- Satyakam Dash, Daniel G Olson, Siu Hung Joshua Chan, Daniel Amador-Noguez, Lee R Lynd, Costas D Maranas
- Metab Eng, 10.1016/j.ymben.2019.06.006
Accelerating flux balance calculations in genome-scale metabolic models by localizing the application of loopless constraints
- Siu H J Chan, Lin Wang, Satyakam Dash, Costas D Maranas
- Bioinformatics, 10.1093/bioinformatics/bty446
Exploring the combinatorial space of complete pathways to chemicals
- Lin Wang, Chiam Yu Ng, Satyakam Dash, Costas D Maranas
- Biochem Soc Trans, 10.1042/bst20170272
A review of computational tools for design and reconstruction of metabolic pathways
- Lin Wang, Satyakam Dash, Chiam Yu Ng, Costas D Maranas
- None, 10.1016/j.synbio.2017.11.002
Development of a core Clostridium thermocellum kinetic metabolic model consistent with multiple genetic perturbations
- Satyakam Dash, Ali Khodayari, Jilai Zhou, …, Daniel G Olson, Lee R Lynd, Costas D Maranas
- None, 10.1186/s13068-017-0792-2
Metabolic modeling of clostridia: current developments and applications
- Satyakam Dash, Chiam Yu Ng, Costas D Maranas
- FEMS Microbiol Lett, 10.1093/femsle/fnw004
Capturing the response of Clostridium acetobutylicum to chemical stressors using a regulated genome-scale metabolic model
- Satyakam Dash, Thomas J Mueller, Keerthi P Venkataramanan, Eleftherios T Papoutsakis, Costas D Maranas
- None, 10.1186/s13068-014-0144-4