Video highlight
Determining growth rates from bright-field images of budding cells through identifying overlaps
- Julian M J Pietsch, Alan F Munoz, Diane-Yayra A Adjavon, …, Iseabail Farquhar, Ivan B N Clark, Peter S Swain
- Elife, 10.7554/elife.79812
Analysing and meta-analysing time-series data of microbial growth and gene expression from plate readers
- Luis Fernando Montaño-Gutierrez, Nahuel Manzanaro Moreno, Iseabail L Farquhar, Yu Huo, Lucia Bandiera, Peter S Swain
- PLoS Comput Biol, 10.1371/journal.pcbi.1010138
Multiple nutrient transporters enable cells to mitigate a rate-affinity tradeoff
- Luis Fernando Montaño-Gutierrez, Kevin Correia, Peter S Swain
- PLoS Comput Biol, 10.1371/journal.pcbi.1010060
Roadmap on biology in time varying environments
- Arvind Murugan, Kabir Husain, Michael J Rust, …, Rama Ranganathan, Hong-Yan Shih, Nigel Goldenfeld
- Phys Biol, 10.1088/1478-3975/abde8d
Distributed and dynamic intracellular organization of extracellular information
- Alejandro A Granados, Julian M J Pietsch, Sarah A Cepeda-Humerez, Iseabail L Farquhar, Gašper Tkačik, Peter S Swain
- Proc Natl Acad Sci U S A, 10.1073/pnas.1716659115
A new method for post-translationally labeling proteins in live cells for fluorescence imaging and tracking
- M Hinrichsen, M Lenz, J M Edwards, …, P S Swain, U Schwarz-Linek, L Regan
- Protein Eng Des Sel, 10.1093/protein/gzx059
Predicting metabolic adaptation from networks of mutational paths
- Christos Josephides, Peter S Swain
- Nat Commun, 10.1038/s41467-017-00828-6
Distributing tasks via multiple input pathways increases cellular survival in stress
- Alejandro A Granados, Matthew M Crane, Luis F Montano-Gutierrez, Reiko J Tanaka, Margaritis Voliotis, Peter S Swain
- Elife, 10.7554/elife.21415
General calibration of microbial growth in microplate readers
- Keiran Stevenson, Alexander F McVey, Ivan B N Clark, Peter S Swain, Teuta Pilizota
- Sci Rep, 10.1038/srep38828
Inferring time derivatives including cell growth rates using Gaussian processes
- Peter S Swain, Keiran Stevenson, Allen Leary, …, Ivan B N Clark, Jackie Vogel, Teuta Pilizota
- Nat Commun, 10.1038/ncomms13766
A geometric analysis of fast-slow models for stochastic gene expression
- Nikola Popović, Carsten Marr, Peter S Swain
- J Math Biol, 10.1007/s00285-015-0876-1
Environmental sensing, information transfer, and cellular decision-making
- Clive G Bowsher, Peter S Swain
- Curr Opin Biotechnol, 10.1016/j.copbio.2014.04.010
Unmixing of fluorescence spectra to resolve quantitative time-series measurements of gene expression in plate readers
- Catherine A Lichten, Rachel White, Ivan B N Clark, Peter S Swain
- BMC Biotechnol, 10.1186/1472-6750-14-11