YEASTRACT+: a portal for the exploitation of global transcription regulation and metabolic model data in yeast biotechnology and pathogenesis
- Miguel Cacho Teixeira, Romeu Viana, Margarida Palma, …, Claudine Chaouiya, Isabel Sá-Correia, Pedro Tiago Monteiro
- Nucleic Acids Res, 10.1093/nar/gkac1041
Prediction of Gene and Genomic Regulation in Candida Species, Using the PathoYeastract Database: A Comparative Genomics Approach
- Pedro Pais, Jorge Oliveira, Romeu Viana, …, Isabel Sá-Correia, Pedro T Monteiro, Miguel C Teixeira
- Methods Mol Biol, 10.1007/978-1-0716-2257-5_23
Boolean function metrics can assist modelers to check and choose logical rules
- John Zobolas, Pedro T Monteiro, Martin Kuiper, Ã…smund Flobak
- J Theor Biol, 10.1016/j.jtbi.2022.111025
The N.C.Yeastract and CommunityYeastract databases to study gene and genomic transcription regulation in non-conventional yeasts
- Cláudia P Godinho, Margarida Palma, Jorge Oliveira, …, Miguel C Teixeira, Pedro T Monteiro, Isabel Sá-Correia
- FEMS Yeast Res, 10.1093/femsyr/foab045
Prediction and Boolean logical modelling of synergistic microRNA regulatory networks during reprogramming of male germline pluripotent stem cells
- Praveen Kumar Guttula, Pedro T Monteiro, Mukesh Kumar Gupta
- Biosystems, 10.1016/j.biosystems.2021.104453
Assessing regulatory features of the current transcriptional network of Saccharomyces cerevisiae
- Pedro T Monteiro, Tiago Pedreira, Monica Galocha, Miguel C Teixeira, Claudine Chaouiya
- Sci Rep, 10.1038/s41598-020-74043-7
A Boolean Logical model for Reprogramming of Testes-derived male Germline Stem Cells into Germline pluripotent stem cells
- Praveen Kumar Guttula, Pedro T Monteiro, Mukesh Kumar Gupta
- Comput Methods Programs Biomed, 10.1016/j.cmpb.2020.105473
Revision of Boolean Models of Regulatory Networks Using Stable State Observations
- Filipe Gouveia, Inês Lynce, Pedro T Monteiro, …, Filipe Gouveia, Inês Lynce, Pedro T Monteiro
- J Comput Biol, 10.1089/cmb.2019.0289
YEASTRACT+: a portal for cross-species comparative genomics of transcription regulation in yeasts
- Pedro T Monteiro, Jorge Oliveira, Pedro Pais, …, Romeu Viana, Isabel Sá-Correia, Miguel C Teixeira
- Nucleic Acids Res, 10.1093/nar/gkz859