Dynamics of co-substrate pools can constrain and regulate metabolic fluxes
- Robert West, Hadrien Delattre, Elad Noor, …, Elad Noor, Elisenda Feliu, Orkun S Soyer
- Elife, 10.7554/elife.84379
What is the key challenge in engineering microbiomes?
- Ophelia S Venturelli, Harris H Wang, Sylvie Estrela, …, Amir Zarrinpar, Chun-Jun Guo, Orkun S Soyer
- Cell Syst, 10.1016/j.cels.2023.01.002
Formation and emergent dynamics of spatially organized microbial systems
- Kelsey Cremin, Sarah J N Duxbury, Jerko Rosko, …, Sarah J N Duxbury, Jerko Rosko, Orkun S Soyer
- None, 10.1098/rsfs.2022.0062
Multisite Enzymes as a Mechanism for Bistability in Reaction Networks
- Clarmyra Hayes, Elisenda Feliu, Orkun S Soyer
- ACS Synth Biol, 10.1021/acssynbio.1c00272
STRONG: metagenomics strain resolution on assembly graphs
- Christopher Quince, Sergey Nurk, Sebastien Raguideau, …, A Murat Eren, Rayan Chikhi, Aaron E Darling
- Genome Biol, 10.1186/s13059-021-02419-7
Scanning Ion Conductance Microscopy Reveals Differences in the Ionic Environments of Gram-Positive and Negative Bacteria
- Kelsey Cremin, Bryn A Jones, James Teahan, …, Munehiro Asally, Orkun S Soyer, Patrick R Unwin
- Anal Chem, 10.1021/acs.analchem.0c03653
Inhibiting the reproduction of SARS-CoV-2 through perturbations in human lung cell metabolic network
- Hadrien Delattre, Kalesh Sasidharan, Orkun S Soyer
- Life Sci Alliance, 10.26508/lsa.202000869
Campylobacter jejuni 11168H Exposed to Penicillin Forms Persister Cells and Cells With Altered Redox Protein Activity
- Helen Morcrette, Andrea Kovacs-Simon, Richard K Tennant, …, Olivia L Champion, Clive S Butler, Richard W Titball
- Front Cell Infect Microbiol, 10.3389/fcimb.2020.565975
Correction to ‘Bioelectrical understanding and engineering of cell biology’
- Zoe Schofield, Gabriel N Meloni, Peter Tran, …, Patrick R Unwin, Munehiro Asally, Orkun S Soyer
- J R Soc Interface, 10.1098/rsif.2020.0435
Thermodynamic modelling of synthetic communities predicts minimum free energy requirements for sulfate reduction and methanogenesis
- Hadrien Delattre, Jing Chen, Matthew J Wade, Orkun S Soyer
- J R Soc Interface, 10.1098/rsif.2020.0053