Single-cell RNA sequencing uncovers heterogeneous transcriptional signatures in tumor-infiltrated dendritic cells in prostate cancer
- Adib Miraki Feriz, Arezou Khosrojerdi, Mohammad Lotfollahi, …, Nicola Silvestris, Hossein Safarpour, Vito Racanelli
- None, 10.1016/j.heliyon.2023.e15694
Best practices for single-cell analysis across modalities
- Lukas Heumos, Anna C Schaar, Christopher Lance, …, Fabiola Curion, Herbert B Schiller, Fabian J Theis
- Nat Rev Genet, 10.1038/s41576-023-00586-w
A Python library for probabilistic analysis of single-cell omics data
- Adam Gayoso, Romain Lopez, Galen Xing, …, Michael I Jordan, Jeffrey Regier, Nir Yosef
- Nat Biotechnol, 10.1038/s41587-021-01206-w
Squidpy: a scalable framework for spatial omics analysis
- Giovanni Palla, Hannah Spitzer, Michal Klein, …, Mohammad Lotfollahi, Sabrina Richter, Fabian J Theis
- Nat Methods, 10.1038/s41592-021-01358-2
Mapping single-cell data to reference atlases by transfer learning
- Mohammad Lotfollahi, Mohsen Naghipourfar, Malte D Luecken, …, Sergei Rybakov, Alexander V Misharin, Fabian J Theis
- Nat Biotechnol, 10.1038/s41587-021-01001-7