Academic lineage
The choice of the objective function in flux balance analysis is crucial for predicting replicative lifespans in yeast
- Barbara Schnitzer, Linnea Österberg, Marija Cvijovic
- PLoS One, 10.1371/journal.pone.0276112
Multi-scale model suggests the trade-off between protein and ATP demand as a driver of metabolic changes during yeast replicative ageing
- Barbara Schnitzer, Linnea Österberg, Iro Skopa, Marija Cvijovic
- PLoS Comput Biol, 10.1371/journal.pcbi.1010261
Scalable and flexible inference framework for stochastic dynamic single-cell models
- Sebastian Persson, Niek Welkenhuysen, Sviatlana Shashkova, …, Gregor W Schmidt, Umberto Picchini, Marija Cvijovic
- PLoS Comput Biol, 10.1371/journal.pcbi.1010082
The Effect of Lithium on the Budding Yeast Saccharomyces cerevisiae upon Stress Adaptation
- Patrick Reith, Svenja Braam, Niek Welkenhuysen, …, Stefan Hohmann, Sviatlana Shashkova, Marija Cvijovic
- None, 10.3390/microorganisms10030590
A novel yeast hybrid modeling framework integrating Boolean and enzyme-constrained networks enables exploration of the interplay between signaling and metabolism
- Linnea Österberg, Iván Domenzain, Julia Münch, Jens Nielsen, Stefan Hohmann, Marija Cvijovic
- PLoS Comput Biol, 10.1371/journal.pcbi.1008891
A novel stepwise integrative analysis pipeline reveals distinct microbiota-host interactions and link to symptoms in irritable bowel syndrome
- Annikka Polster, Lena Öhman, Julien Tap, …, Hans Törnblom, Marija Cvijovic, Magnus Simrén
- Sci Rep, 10.1038/s41598-021-84686-9
Cell polarisation in a bulk-surface model can be driven by both classic and non-classic Turing instability
- Johannes Borgqvist, Adam Malik, Carl Lundholm, Anders Logg, Philip Gerlee, Marija Cvijovic
- NPJ Syst Biol Appl, 10.1038/s41540-021-00173-x
The synergy of damage repair and retention promotes rejuvenation and prolongs healthy lifespans in cell lineages
- Barbara Schnitzer, Johannes Borgqvist, Marija Cvijovic
- PLoS Comput Biol, 10.1371/journal.pcbi.1008314
Mig1 localization exhibits biphasic behavior which is controlled by both metabolic and regulatory roles of the sugar kinases
- Gregor W Schmidt, Niek Welkenhuysen, Tian Ye, Marija Cvijovic, Stefan Hohmann
- Mol Genet Genomics, 10.1007/s00438-020-01715-4
Fine-Tuning of Energy Levels Regulates SUC2 via a SNF1-Dependent Feedback Loop
- Sebastian Persson, Niek Welkenhuysen, Sviatlana Shashkova, Marija Cvijovic
- None, 10.3389/fphys.2020.00954
Symmetry structures in dynamic models of biochemical systems
- Fredrik Ohlsson, Johannes Borgqvist, Marija Cvijovic
- J R Soc Interface, 10.1098/rsif.2020.0204
Synergistic effects of repair, resilience and retention of damage determine the conditions for replicative ageing
- Johannes Borgqvist, Niek Welkenhuysen, Marija Cvijovic
- Sci Rep, 10.1038/s41598-020-58444-2