Academic lineage
- Bernhard Ø Palsson - Postdoctoral Associate
LuxR Solos from Environmental Fluorescent Pseudomonads
- Cristina Bez, Sonia Covaceuszach, Iris Bertani, Kumari Sonal Choudhary, Vittorio Venturi
- mSphere, 10.1128/msphere.01322-20
Pangenome Analytics Reveal Two-Component Systems as Conserved Targets in ESKAPEE Pathogens
- Akanksha Rajput, Yara Seif, Kumari Sonal Choudhary, …, Saugat Poudel, Jonathan M Monk, Bernhard O Palsson
- mSystems, 10.1128/msystems.00981-20
Elucidation of Regulatory Modes for Five Two-Component Systems in Escherichia coli Reveals Novel Relationships
- Kumari Sonal Choudhary, Julia A Kleinmanns, Katherine Decker, …, Richard Szubin, Yara Seif, Bernhard O Palsson
- mSystems, 10.1128/msystems.00980-20
The Bitome: digitized genomic features reveal fundamental genome organization
- Cameron R Lamoureux, Kumari Sonal Choudhary, Zachary A King, …, Donghui Choe, Byung-Kwan Cho, Bernhard O Palsson
- Nucleic Acids Res, 10.1093/nar/gkaa774
Metabolic and genetic basis for auxotrophies in Gram-negative species
- Yara Seif, Kumari Sonal Choudhary, Ying Hefner, Amitesh Anand, Laurence Yang, Bernhard O Palsson
- Proc Natl Acad Sci U S A, 10.1073/pnas.1910499117
The Escherichia coli transcriptome mostly consists of independently regulated modules
- Anand V Sastry, Ye Gao, Richard Szubin, …, Laurence Yang, Zachary A King, Bernhard O Palsson
- Nat Commun, 10.1038/s41467-019-13483-w
The Staphylococcus aureus Two-Component System AgrAC Displays Four Distinct Genomic Arrangements That Delineate Genomic Virulence Factor Signatures
- Kumari S Choudhary, Nathan Mih, Jonathan Monk, …, James T Yurkovich, George Sakoulas, Bernhard O Palsson
- None, 10.3389/fmicb.2018.01082
EGFR Signal-Network Reconstruction Demonstrates Metabolic Crosstalk in EMT
- Kumari Sonal Choudhary, Neha Rohatgi, Skarphedinn Halldorsson, …, Thorarinn Gudjonsson, Steinn Gudmundsson, Ottar Rolfsson
- PLoS Comput Biol, 10.1371/journal.pcbi.1004924
Census of solo LuxR genes in prokaryotic genomes
- Sanjarbek Hudaiberdiev, Kumari S Choudhary, Roberto Vera Alvarez, …, Balázs Ligeti, Doriano Lamba, Sándor Pongor
- Front Cell Infect Microbiol, 10.3389/fcimb.2015.00020