Non-additive genetic components contribute significantly to population-wide gene expression variation
- Andreas Tsouris, Gauthier Brach, Joseph Schacherer, …, Gauthier Brach, Joseph Schacherer, Jing Hou
- None, 10.1101/2023.07.21.550013
Diallel panel reveals a significant impact of low-frequency genetic variants on gene expression variation in yeast
- Andreas Tsouris, Gauthier Brach, Anne Friedrich, …, Anne Friedrich, Jing Hou, Joseph Schacherer
- None, 10.1101/2023.07.21.550015
Impact of the acquired subgenome on the transcriptional landscape in Brettanomyces bruxellensis allopolyploids
- Arthur Jallet, Anne Friedrich, Joseph Schacherer, …, Arthur Jallet, Anne Friedrich, Joseph Schacherer
- G3 (Bethesda), 10.1093/g3journal/jkad115
Contrasting Genomic Evolution Between Domesticated and Wild Kluyveromyces lactis Yeast Populations
- Anne Friedrich, Jean-Sébastien Gounot, Andreas Tsouris, …, Kelle Freel, Claudia Caradec, Joseph Schacherer
- Genome Biol Evol, 10.1093/gbe/evad004
Lessons from the meiotic recombination landscape of the ZMM deficient budding yeast Lachancea waltii
- Fabien Dutreux, Abhishek Dutta, Emilien Peltier, …, Anne Friedrich, Bertrand Llorente, Joseph Schacherer
- PLoS Genet, 10.1371/journal.pgen.1010592
Loss of Heterozygosity Spectrum Depends on Ploidy Level in Natural Yeast Populations
- Abhishek Dutta, Fabien Dutreux, Joseph Schacherer, Abhishek Dutta, Fabien Dutreux, Joseph Schacherer
- Mol Biol Evol, 10.1093/molbev/msac214
Loss-of-function mutation survey revealed that genes with background-dependent fitness are rare and functionally related in yeast
- Elodie Caudal, Anne Friedrich, Arthur Jallet, Marion Garin, Jing Hou, Joseph Schacherer
- Proc Natl Acad Sci U S A, 10.1073/pnas.2204206119
Towards accurate, contiguous and complete alignment-based polyploid phasing algorithms
- Omar Abou Saada, Anne Friedrich, Joseph Schacherer, …, Omar Abou Saada, Anne Friedrich, Joseph Schacherer
- Genomics, 10.1016/j.ygeno.2022.110369
Brettanomyces bruxellensis: Overview of the genetic and phenotypic diversity of an anthropized yeast
- Jules Harrouard, Chris Eberlein, Patricia Ballestra, …, Cécile Miot-Sertier, Joseph Schacherer, Warren Albertin
- Mol Ecol, 10.1111/mec.16439
Domestication reprogrammed the budding yeast life cycle
- Matteo De Chiara, Benjamin P Barré, Karl Persson, …, Uroš Petrovič, Jonas Warringer, Gianni Liti
- Nat Ecol Evol, 10.1038/s41559-022-01671-9
Phased polyploid genomes provide deeper insight into the multiple origins of domesticated Saccharomyces cerevisiae beer yeasts
- Omar Abou Saada, Andreas Tsouris, Chris Large, Anne Friedrich, Maitreya J Dunham, Joseph Schacherer
- Curr Biol, 10.1016/j.cub.2022.01.068
Sex without crossing over in the yeast Saccharomycodes ludwigii
- Ioannis A Papaioannou, Fabien Dutreux, France A Peltier, …, Anne Friedrich, Joseph Schacherer, Michael Knop
- Genome Biol, 10.1186/s13059-021-02521-w