Academic lineage
- Bernhard Ø Palsson - Ph.D. student
Comprehensive Mapping of Pluripotent Stem Cell Metabolism Using Dynamic Genome-Scale Network Modeling
- Sriram Chandrasekaran, Jin Zhang, Zhen Sun, …, Hu Li, George Q Daley, James J Collins
- Cell Rep, 10.1016/j.celrep.2017.07.048
Reconstruction and Use of Microbial Metabolic Networks: the Core Escherichia coli Metabolic Model as an Educational Guide
- Jeffrey D Orth, R M T Fleming, Bernhard Ø Palsson
- EcoSal Plus, 10.1128/ecosalplus.10.2.1
Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments
- Jonathan M Monk, Pep Charusanti, Ramy K Aziz, …, Jeffrey D Orth, Adam M Feist, Bernhard Ø Palsson
- Proc Natl Acad Sci U S A, 10.1073/pnas.1307797110
In silico method for modelling metabolism and gene product expression at genome scale
- Joshua A Lerman, Daniel R Hyduke, Haythem Latif, …, Joshua N Adkins, Karsten Zengler, Bernhard O Palsson
- Nat Commun, 10.1038/ncomms1928
Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0
- Jan Schellenberger, Richard Que, Ronan M T Fleming, …, Joseph Kang, Daniel R Hyduke, Bernhard Ø Palsson
- Nat Protoc, 10.1038/nprot.2011.308
Systematizing the generation of missing metabolic knowledge
- Jeffrey D Orth, Bernhard Ø Palsson
- Biotechnol Bioeng, 10.1002/bit.22844
Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli
- Adam M Feist, Daniel C Zielinski, Jeffrey D Orth, Jan Schellenberger, Markus J Herrgard, Bernhard Ø Palsson
- Metab Eng, 10.1016/j.ymben.2009.10.003