Academic lineage
- Bernhard Ø Palsson - Ph.D. student
Deep-learning based spatio-temporal generative model on assessing state-of-health for Li-ion batteries with partially-cycled profiles
- Hyunjun Lee, Zoe K Scott-Nevros, Dongjun Lim, …, Yunseok Choi, Hankwon Lim, Donghyuk Kim
- Mater Horiz, 10.1039/d3mh00013c
Characterization of Klebsiella pneumoniae bacteriophages, KP1 and KP12, with deep learning-based structure prediction
- Youngju Kim, Sang-Mok Lee, Linh Khanh Nong, …, Jaehyung Kim, Seung Bum Kim, Donghyuk Kim
- None, 10.3389/fmicb.2022.990910
Deep-learning optimized DEOCSU suite provides an iterable pipeline for accurate ChIP-exo peak calling
- Ina Bang, Sang-Mok Lee, Seojoung Park, …, Ye Gao, Bernhard O Palsson, Donghyuk Kim
- Brief Bioinform, 10.1093/bib/bbad024
A Machine Learning Approach Reveals a Microbiota Signature for Infection with Mycobacterium avium subsp. paratuberculosis in Cattle
- Sang-Mok Lee, Hong-Tae Park, Seojoung Park, …, Danil Kim, Han Sang Yoo, Donghyuk Kim
- Microbiol Spectr, 10.1128/spectrum.03134-22
ChEAP: ChIP-exo analysis pipeline and the investigation of Escherichia coli RpoN protein-DNA interactions
- Ina Bang, Linh Khanh Nong, Joon Young Park, …, Hoa Thi Le, Sang- Mok Lee, Donghyuk Kim
- None, 10.1016/j.csbj.2022.11.053
Revealing Causes for False-Positive and False-Negative Calling of Gene Essentiality in Escherichia coli Using Transposon Insertion Sequencing
- Donghui Choe, Uigi Kim, Soonkyu Hwang, …, Suhyung Cho, Bernhard Palsson, Byung-Kwan Cho
- mSystems, 10.1128/msystems.00896-22
Delineating transcriptional crosstalk between Mycobacterium avium subsp. paratuberculosis and human THP-1 cells at the early stage of infection via dual RNA-seq analysis
- Hong-Tae Park, Sang-Mok Lee, Seyoung Ko, …, Min-Kyoung Shin, Donghyuk Kim, Han Sang Yoo
- Vet Res, 10.1186/s13567-022-01089-y
proChIPdb: a chromatin immunoprecipitation database for prokaryotic organisms
- Katherine T Decker, Ye Gao, Kevin Rychel, …, Donghyuk Kim, Byung-Kwan Cho, Bernhard O Palsson
- Nucleic Acids Res, 10.1093/nar/gkab1043
Rapid Real-Time Polymerase Chain Reaction for Salmonella Serotyping Based on Novel Unique Gene Markers by Pangenome Analysis
- Seung-Min Yang, Eiseul Kim, Dayoung Kim, …, Donghyuk Kim, Hyunjin Yoon, Hae-Yeong Kim
- None, 10.3389/fmicb.2021.750379
Alpha-2-Macroglobulin as a New Promising Biomarker Improving the Diagnostic Sensitivity of Bovine Paratuberculosis
- Hyun-Eui Park, Jin-Sik Park, Hong-Tae Park, …, Donghyuk Kim, Han Sang Yoo, Min-Kyoung Shin
- None, 10.3389/fvets.2021.637716
Genomic diversity of Mycobacterium avium subsp. paratuberculosis: pangenomic approach for highlighting unique genomic features with newly constructed complete genomes
- Jaewon Lim, Hong-Tae Park, Seyoung Ko, …, Min-Kyoung Shin, Han Sang Yoo, Donghyuk Kim
- Vet Res, 10.1186/s13567-021-00905-1
Development of a Genoserotyping Method for Salmonella Infantis Detection on the Basis of Pangenome Analysis
- Seung-Min Yang, Jiwon Baek, Eiseul Kim, …, Donghyuk Kim, Hyunjin Yoon, Hae-Yeong Kim
- None, 10.3390/microorganisms9010067
Metabolic role of pyrophosphate-linked phosphofructokinase pfk for C1 assimilation in Methylotuvimicrobium alcaliphilum 20Z
- Anh Duc Nguyen, Gayoung Nam, Donghyuk Kim, Eun Yeol Lee
- Microb Cell Fact, 10.1186/s12934-020-01382-5