Using machine learning to predict the effects and consequences of mutations in proteins
- Daniel J Diaz, Anastasiya V Kulikova, Andrew D Ellington, …, Anastasiya V Kulikova, Andrew D Ellington, Claus O Wilke
- Curr Opin Struct Biol, 10.1016/j.sbi.2022.102518
Kinetics of elementary steps in loop-mediated isothermal amplification (LAMP) show that strand invasion during initiation is rate-limiting
- Tyler L Dangerfield, Inyup Paik, Sanchita Bhadra, …, Sanchita Bhadra, Kenneth A Johnson, Andrew D Ellington
- Nucleic Acids Res, 10.1093/nar/gkac1221
Engineering Geobacter pili to produce metal:organic filaments
- Eric Szmuc, David J F Walker, Dmitry Kireev, …, Derek R Lovley, Benjamin Keitz, Andrew Ellington
- Biosens Bioelectron, 10.1016/j.bios.2022.114993
Ribosome-mediated biosynthesis of pyridazinone oligomers in vitro
- Joongoo Lee, Jaime N Coronado, Namjin Cho, …, Andrew D Ellington, Eric V Anslyn, Michael C Jewett
- Nat Commun, 10.1038/s41467-022-33701-2
GroovDB: A Database of Ligand-Inducible Transcription Factors
- Simon d’Oelsnitz, Joshua D Love, Daniel J Diaz, …, Joshua D Love, Daniel J Diaz, Andrew D Ellington
- ACS Synth Biol, 10.1021/acssynbio.2c00382
Antibody escape and cryptic cross-domain stabilization in the SARS-CoV-2 Omicron spike protein
- Kamyab Javanmardi, Thomas H Segall-Shapiro, Chia-Wei Chou, …, Andrew D Ellington, Ilya J Finkelstein, Jimmy D Gollihar
- Cell Host Microbe, 10.1016/j.chom.2022.07.016
Integrated Top-Down and Bottom-Up Mass Spectrometry for Characterization of Diselenide Bridging Patterns of Synthetic Selenoproteins
- Eleanor Watts, Ross Thyer, Andrew D Ellington, Jennifer S Brodbelt
- Anal Chem, 10.1021/acs.analchem.2c01433
Using fungible biosensors to evolve improved alkaloid biosyntheses
- Wantae Kim, Nathaniel T Burkholder, Kamyab Javanmardi, …, Yan Zhang, Hal S Alper, Andrew D Ellington
- Nat Chem Biol, 10.1038/s41589-022-01072-w
RNP-Based Control Systems for Genetic Circuits in Synthetic Biology Beyond CRISPR
- Trevor R Simmons, Andrew D Ellington, Lydia M Contreras
- Methods Mol Biol, 10.1007/978-1-0716-2421-0_1
