Academic lineage
Advanced transcriptomic analysis reveals the role of efflux pumps and media composition in antibiotic responses of Pseudomonas aeruginosa
- Akanksha Rajput, Hannah Tsunemoto, Anand V Sastry, …, Siddharth M Chauhan, Joe Pogliano, Bernhard O Palsson
- Nucleic Acids Res, 10.1093/nar/gkac743
Membrane transporter identification and modulation via adaptive laboratory evolution
- Mohammad S Radi, Jesus E SalcedoSora, Se Hyeuk Kim, …, Douglas B Kell, Markus J HerrgÃ¥rd, Adam M Feist
- Metab Eng, 10.1016/j.ymben.2022.05.004
Machine learning from Pseudomonas aeruginosa transcriptomes identifies independently modulated sets of genes associated with known transcriptional regulators
- Akanksha Rajput, Hannah Tsunemoto, Anand V Sastry, …, Joseph Sugie, Joe Pogliano, Bernhard O Palsson
- Nucleic Acids Res, 10.1093/nar/gkac187
Optimal dimensionality selection for independent component analysis of transcriptomic data
- John Luke McConn, Cameron R Lamoureux, Saugat Poudel, Bernhard O Palsson, Anand V Sastry
- BMC Bioinformatics, 10.1186/s12859-021-04497-7
Machine Learning Uncovers a Data-Driven Transcriptional Regulatory Network for the Crenarchaeal Thermoacidophile Sulfolobus acidocaldarius
- Siddharth M Chauhan, Saugat Poudel, Kevin Rychel, …, Yuan Yuan, Bernhard O Palsson, Anand V Sastry
- None, 10.3389/fmicb.2021.753521