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2023 Articles
71 articles
BMP suppresses WNT to integrate patterning of orthogonal body axes in adult planarians
- Eleanor G Clark, Christian P Petersen, Eleanor G Clark, Christian P Petersen
- bioRxiv : the preprint server for biology, 10.1101/2023.01.10.523528
New technologies to study helminth development and host-parasite interactions
- Collette Britton, Roz Laing, Tom N McNeilly, …, Rick M Maizels, Eileen Devaney, Victoria Gillan
- Int J Parasitol, 10.1016/j.ijpara.2022.11.012
PLANAtools-An interactive gene expression repository for the planarian Schmidtea mediterranea
- Michael Hoffman, Omri Wurtzel, Michael Hoffman, Omri Wurtzel
- None, 10.3389/fcell.2023.1149537
CIARA: a cluster-independent algorithm for identifying markers of rare cell types from single-cell sequencing data
- Gabriele Lubatti, Marco Stock, Ane Iturbide, …, Shankar Srinivas, Maria-Elena Torres-Padilla, Antonio Scialdone
- Development, 10.1242/dev.201264
The planarian flatworm Schmidtea mediterranea
- Leonard Drees, Leonard Drees, Jochen C Rink, Leonard Drees, Jochen C Rink
- Nat Methods, 10.1038/s41592-022-01727-5
m6 A promotes planarian regeneration
- Guanshen Cui, Jia-Yi Zhou, Xin-Yang Ge, …, Da-Li Han, Yun-Gui Yang, Ying Yang
- Cell Prolif, 10.1111/cpr.13481
Wnt/β-catenin signalling is required for pole-specific chromatin remodeling during planarian regeneration
- Eudald Pascual-Carreras, Marta MarÃn-Barba, Sergio Castillo-Lara, …, Josep F Abril, Emili Saló, Teresa Adell
- Nat Commun, 10.1038/s41467-023-35937-y
Wnt signaling in whole-body regeneration
- Christian P Petersen, Christian P Petersen, Christian P Petersen
- Curr Top Dev Biol, 10.1016/bs.ctdb.2023.01.007
Single-cell analysis of shared signatures and transcriptional diversity during zebrafish development
- Abhinav Sur, Yiqun Wang, Paulina Capar, …, Paulina Capar, Gennady Margolin, Jeffrey A Farrell
- bioRxiv : the preprint server for biology, 10.1101/2023.03.20.533545
Dissecting cell identity via network inference and in silico gene perturbation
- Kenji Kamimoto, Blerta Stringa, Christy M Hoffmann, …, Kunal Jindal, Lilianna Solnica-Krezel, Samantha A Morris
- Nature, 10.1038/s41586-022-05688-9
2022 Articles
8 articles
Benchmarking automated cell type annotation tools for single-cell ATAC-seq data
- Yuge Wang, Xingzhi Sun, Hongyu Zhao, Yuge Wang, Xingzhi Sun, Hongyu Zhao
- None, 10.3389/fgene.2022.1063233
Gene regulatory network reconfiguration in direct lineage reprogramming
- Kenji Kamimoto, Mohd Tayyab Adil, Kunal Jindal, …, Wenjun Kong, Xue Yang, Samantha A Morris
- Stem Cell Reports, 10.1016/j.stemcr.2022.11.010
Spatial omics technologies at multimodal and single cell/subcellular level
- Jiwoon Park, Junbum Kim, Tyler Lewy, …, Olivier Elemento, André F Rendeiro, Christopher E Mason
- Genome Biol, 10.1186/s13059-022-02824-6
Djsnon, a downstream gene of Djfoxk1, is required for the regeneration of the planarian central nervous system
- Yajun Guo, Yujia Sun, Mengwen Ma, …, Yongding Huang, Shoutao Zhang, Qingnan Tian
- Biochem Biophys Res Commun, 10.1016/j.bbrc.2022.12.074
Cell quiescence in planarian stem cells, interplay between p53 and nutritional stimuli
- Gaetana Gambino, Paola Iacopetti, Patrizia Guidi, …, Stefania Linsalata, Alessandra Salvetti, Leonardo Rossi
- Open Biol, 10.1098/rsob.220216
Ancient multiplicity in cyclic nucleotide-gated (CNG) cation channel repertoire was reduced in the ancestor of Olfactores before re-expansion by whole genome duplications in vertebrates
- David Lagman, Helen J Haines, Xesús M Abalo, …, Helen J Haines, Xesús M Abalo, Dan Larhammar
- PLoS One, 10.1371/journal.pone.0279548
The transcription factor Zic4 promotes tentacle formation and prevents epithelial transdifferentiation in Hydra
- Matthias Christian Vogg, Jaroslav Ferenc, Wanda Christa Buzgariu, …, Stéphane Vincent, Brigitte Galliot, Charisios D Tsiairis
- Sci Adv, 10.1126/sciadv.abo0694
Cancer plasticity: Investigating the causes for this agility
- Shubhraneel Saha, Nikita Pradhan, B Neha, …, Ravikiran Mahadevappa, Shilpi Minocha, Saran Kumar
- Semin Cancer Biol, 10.1016/j.semcancer.2022.12.005