Channel: Genetic interaction networks

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    2023 Articles

    3 100 articles

    SPT5 affects the rate of mRNA degradation and physically interacts with CCR4 but does not control mRNA deadenylation

    • Yajun Cui, Yueh-Chin Chiang, Palaniswamy Viswanathan, …, Palaniswamy Viswanathan, Darren J Lee, Clyde L Denis
    • None, 10.4236/ajmb.2012.21002
    Comment Section

    The SAGA HAT module is tethered by its SWIRM domain and modulates activity of the SAGA DUB module

    • Sara T Haile, Sanim Rahman, James K Fields, …, Benjamin C Orsburn, Namandjé N Bumpus, Cynthia Wolberger
    • Biochim Biophys Acta Gene Regul Mech, 10.1016/j.bbagrm.2023.194929
    Comment Section

    NetProphet 3: a machine learning framework for transcription factor network mapping and multi-omics integration

    Comment Section

    A Suite of New Strain Construction Vectors for Gene Expression Knockdown in Budding Yeast

    • Christian A Shively, Fengping Dong, Robi D Mitra, …, Christian A Shively, Fengping Dong, Robi D Mitra
    • ACS Synth Biol, 10.1021/acssynbio.2c00547
    Comment Section

    Spt6 directly interacts with Cdc73 and is required for Paf1 complex occupancy at active genes in Saccharomyces cerevisiae

    • Mitchell A Ellison, Sanchirmaa Namjilsuren, Margaret K Shirra, …, Yufei Xiang, Yi Shi, Karen M Arndt
    • Nucleic Acids Res, 10.1093/nar/gkad180
    Comment Section

    Kar4 is required for the normal pattern of meiotic gene expression

    • Zachory M Park, Matthew Remillard, Ethan Belnap, …, Matthew Remillard, Ethan Belnap, Mark D Rose
    • PLoS Genet, 10.1371/journal.pgen.1010898
    Comment Section

    Pbp1 associates with Puf3 and promotes translation of its target mRNAs involved in mitochondrial biogenesis

    • Floortje van de Poll, Benjamin M Sutter, Michelle Grace Acoba, …, Yu-San Yang, Chien-Der Lee, Benjamin P Tu
    • PLoS Genet, 10.1371/journal.pgen.1010774
    Comment Section

    Recruitment of the lipid kinase Mss4 to the meiotic spindle pole promotes prospore membrane formation in Saccharomyces cerevisiae

    • Greisly Nunez, Kai Zhang, Kaveh Mogbheli, …, Kaveh Moghbeli, Nancy M Hollingsworth, Aaron M Neiman
    • Mol Biol Cell, 10.1091/mbc.e22-11-0515
    Comment Section

    PCID2 Subunit of the Drosophila TREX-2 Complex Has Two RNA-Binding Regions

    • Yulia A Vdovina, Maria M Kurshakova, Sofia G Georgieva, …, Maria M Kurshakova, Sofia G Georgieva, Daria V Kopytova
    • None, 10.3390/cimb45070357
    Comment Section

    Interactions between Fkh1 monomers stabilize its binding to DNA replication origins

    • Allan Reinapae, Ivar Ilves, Henel Jürgens, …, Signe Värv, Kersti Kristjuhan, Arnold Kristjuhan
    • J Biol Chem, 10.1016/j.jbc.2023.105026
    Comment Section

    2022 Articles

    257 articles

    Prevalent and dynamic binding of the cell cycle checkpoint kinase Rad53 to gene promoters

    • Yi-Jun Sheu, Risa Karakida Kawaguchi, Jesse Gillis, …, Risa Karakida Kawaguchi, Jesse Gillis, Bruce Stillman
    • Elife, 10.7554/elife.84320
    Comment Section

    Ubiquitin-Conjugating Enzymes Ubc1 and Ubc4 Mediate the Turnover of Hap4, a Master Regulator of Mitochondrial Biogenesis in Saccharomyces cerevisiae

    Comment Section

    Polarization and cell-fate decision facilitated by the adaptor Ste50p in Saccharomyces cerevisiae

    Comment Section

    REFINING CELLULAR PATHWAY MODELS USING AN ENSEMBLE OF HETEROGENEOUS DATA SOURCES

    • Alexander M Franks, Florian Markowetz, Edoardo M Airoldi, …, Alexander M Franks, Florian Markowetz, Edoardo M Airoldi
    • None, 10.1214/16-aoas915
    Comment Section

    Bidirectional promoter activity from expression cassettes can drive off-target repression of neighboring gene translation

    • Emily N Powers, Charlene Chan, Ella Doron-Mandel, …, Jenny Kim Kim, Marko Jovanovic, Gloria Ann Brar
    • Elife, 10.7554/elife.81086
    Comment Section

    Achog1 is required for the asexual sporulation, stress responses and pigmentation of Aspergillus cristatus

    Comment Section

    Transcription factor binding process is the primary driver of noise in gene expression

    Comment Section

    Enhanced Transcriptional Strength of HIV-1 Subtype C Minimizes Gene Expression Noise and Confers Stability to the Viral Latent State

    • Sreshtha Pal, Vijeta Jaiswal, Narendra Nala, …, Vijeta Jaiswal, Narendra Nala, Udaykumar Ranga
    • J Virol, 10.1128/jvi.01376-22
    Comment Section

    Expanded in vivo substrate profile of the yeast N-terminal acetyltransferase NatC

    • Petra Van Damme, Camilla Osberg, Veronique Jonckheere, …, Kris Gevaert, Thomas Arnesen, Henriette Aksnes
    • J Biol Chem, 10.1016/j.jbc.2022.102824
    Comment Section

    Chromosome-dependent aneuploid formation in Spo11-less meiosis

    • Yuri Kawashima, Arisa H Oda, Yasushi Hikida, …, Arisa H Oda, Yasushi Hikida, Kunihiro Ohta
    • Genes Cells, 10.1111/gtc.12998
    Comment Section