De novo DNA synthesis via enzymatic processes has the potential to offer faster and more accurate alternative to conventional chemical DNA synthesis.
2023 Articles
687 articles
DNA damage twists base choreography
- Serge L Smirnov, Serge L Smirnov
- Nat Chem Biol, 10.1038/s41589-023-01315-4
Towards the controlled enzymatic synthesis of LNA containing oligonucleotides
- Nazarii Sabat, Dace Katkevica, Karlis Pajuste, …, Kurt Püntener, Filippo Sladojevich, Marcel Hollenstein
- None, 10.3389/fchem.2023.1161462
PCR-Based Assembly of Gene Sequences by Thermodynamically Balanced Inside-Out (TBIO) Gene Synthesis
- Timothy J Ragan, Helen A Vincent, Timothy J Ragan, …, Helen A Vincent, Timothy J Ragan, Helen A Vincent
- Methods Mol Biol, 10.1007/978-1-0716-3004-4_6
Annotating and prioritizing human non-coding variants with RegulomeDB v.2
- Shengcheng Dong, Nanxiang Zhao, Emma Spragins, …, J Michael Cherry, Alan P Boyle, Benjamin C Hitz
- Nat Genet, 10.1038/s41588-023-01365-3
Assessment of enzymatically synthesized DNA for gene assembly
- Brooke L Simmons, Nathan D McDonald, Natalie G Robinett, Brooke L Simmons, Nathan D McDonald, Natalie G Robinett
- None, 10.3389/fbioe.2023.1208784
In situ enzymatic template replication on DNA microarrays
- Erika Schaudy, Jory Lietard, Erika Schaudy, …, Jory Lietard, Erika Schaudy, Jory Lietard
- Methods, 10.1016/j.ymeth.2023.03.006
Abasic site-peptide cross-links are blocking lesions repaired by AP endonucleases
- Anna V Yudkina, Nikita A Bulgakov, Daria V Kim, …, Murat K Saparbaev, Vladimir V Koval, Dmitry O Zharkov
- Nucleic Acids Res, 10.1093/nar/gkad423
Sequencing for oxidative DNA damage at single-nucleotide resolution with click-code-seq v2.0
- Aaron M Fleming, Aaron M Fleming, Songjun Xiao, Aaron M Fleming, Cynthia J Burrows
- Chem Commun (Camb), 10.1039/d3cc02699j
Advanced preparation of fragment libraries enabled by oligonucleotide-modified 2′,3′-dideoxynucleotides
- Žana Kapustina, Simona Žeimytė, Jevgenija Jakubovska, …, Rūta Sindikevičienė, Inga Čikotienė, Arvydas Lubys
- None, 10.1038/s42004-022-00649-9
Locating, tracing and sequencing multiple expanded genetic letters in complex DNA context via a bridge-base approach
- Honglei Wang, Wuyuan Zhu, Chao Wang, …, Anlian Zhu, Guisheng Zhang, Lingjun Li
- Nucleic Acids Res, 10.1093/nar/gkad218
2022 Articles
52 articles
Encoding, Decoding, and Rendering Information in DNA Nanoswitch Libraries
- Hannah Talbot, Ken Halvorsen, Arun Richard Chandrasekaran, …, Hannah Talbot, Ken Halvorsen, Arun Richard Chandrasekaran
- ACS Synth Biol, 10.1021/acssynbio.2c00649
Synthesis of Cy5-Labelled C5-Alkynyl-modified cytidine triphosphates via Sonogashira coupling for DNA labelling
- Viktoriya E Kuznetsova, Valeriy E Shershov, Teimur O Guseinov, …, Alexander S Zasedatelev, Sergey A Lapa, Alexander V Chudinov
- Bioorg Chem, 10.1016/j.bioorg.2022.106315
Pif1 family helicases promote mutation avoidance during DNA replication
- Zhi-Xiong Zhou, Cindy Follonier, Scott A Lujan, …, Adam B Burkholder, Virginia A Zakian, Thomas A Kunkel
- Nucleic Acids Res, 10.1093/nar/gkac1127
Nucleosomes and their complexes in the cryoEM era: Trends and limitations
- Grigoriy A Armeev, Anna K Gribkova, Alexey K Shaytan, Grigoriy A Armeev, Anna K Gribkova, Alexey K Shaytan
- None, 10.3389/fmolb.2022.1070489
Human FACT subunits coordinate to catalyze both disassembly and reassembly of nucleosomes
- Micah J McCauley, Michael Morse, Nicole Becker, …, Georges Mer, L James Maher, Mark C Williams
- Cell Rep, 10.1016/j.celrep.2022.111858
Kinetics of elementary steps in loop-mediated isothermal amplification (LAMP) show that strand invasion during initiation is rate-limiting
- Tyler L Dangerfield, Inyup Paik, Sanchita Bhadra, …, Sanchita Bhadra, Kenneth A Johnson, Andrew D Ellington
- Nucleic Acids Res, 10.1093/nar/gkac1221
Oligonucleotide-Chemosensor Conjugate as a Dual Responsive Detection Platform and Its Application for Simultaneous Detection of ATP and Zn2
- Jinyoung Oh, Chanhyuk Min, Daeho Park, …, Chanhyuk Min, Daeho Park, Min Su Han
- ACS Sens, 10.1021/acssensors.2c02006
Chloroacetamide-Modified Nucleotide and RNA for Bioconjugations and Cross-Linking with RNA-Binding Proteins
- Mária Brunderová, Matouš Krömer, Marta Vlková, …, Matouš Krömer, Marta Vlková, Michal Hocek
- Angew Chem Int Ed Engl, 10.1002/anie.202213764
Beyond Sequence: Internucleosomal Interactions Dominate Array Assembly
- Yaqing Wang, Tommy Stormberg, Mohtadin Hashemi, …, Mohtadin Hashemi, Anatoly B Kolomeisky, Yuri L Lyubchenko
- J Phys Chem B, 10.1021/acs.jpcb.2c05321