Human gut metatranscriptome changes induced by a fermented milk product are associated with improved tolerance to a flatulogenic diet
- Iñigo Oyarzun, Boris Le Nevé, Francisca Yañez, …, Fernando Azpiroz, Julien Tap, Chaysavanh Manichanh
- None, 10.1016/j.csbj.2022.04.001
Gut bacterial metabolites modulate endoplasmic reticulum stress
- Xiaobo Ke, Kwontae You, Matthieu Pichaud, …, Hera Vlamakis, Jeffrey A Porter, Ramnik J Xavier
- Genome Biol, 10.1186/s13059-021-02496-8
Gut microbiome ADP-ribosyltransferases are widespread phage-encoded fitness factors
- Eric M Brown, Hugo Arellano-Santoyo, Emily R Temple, …, Jeffrey A Porter, Hera Vlamakis, Ramnik J Xavier
- Cell Host Microbe, 10.1016/j.chom.2021.07.011
Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis
- Damian R Plichta, Juhi Somani, Matthieu Pichaud, …, Dinesh Khanna, Shiv Pillai, Ramnik J Xavier
- Genome Med, 10.1186/s13073-021-00853-7
MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data
- Florian Plaza Oñate, Emmanuelle Le Chatelier, Mathieu Almeida, …, Frédéric Magoulès, S Dusko Ehrlich, Matthieu Pichaud
- Bioinformatics, 10.1093/bioinformatics/bty830